MDAnalysis: Outreach and Project Manager
To grow the MDAnalysis community sustainably.
Project Lead: Richard Gowers (Open Molecular Software Foundation)
NGFF: Democratize Access to Next-Generation Bioimaging Data
To coordinate and foster next-generation file formats while increasing community access to public imaging data.
Project Lead: Josh Moore (German BioImaging Society)
NiPreps – a Community Framework for Reproducible Neuroimaging
To solidify NiPreps by boosting community growth, securing maintenance, and developing new components to expand the diversity of supported data such as imaging parameters, modalities, populations, and species.
Project Lead: Oscar Esteban (Lausanne University Hospital and University of Lausanne)
Open Health Imaging Foundation Web Medical Imaging Framework
To develop, upgrade, and migrate documentation; perform software maintenance; and provide community support for the Open Health Imaging Foundation web-based medical imaging framework.
Project Lead: Gordon Harris (Massachusetts General Hospital)
Open Source Ontologies to Power an Open Science Community
To develop open medical ontologies and analytics that enable large-scale generation of real-world evidence on disease and the effects of medical interventions across the world’s electronic health data.
Project Lead: George Hripcsak (Columbia University)
OpenSim Creator: Empowering Biomedical Research with Biomechanical Models
To develop accurate, fast, and researcher-friendly open tools for creating and simulating neuromuscular and musculoskeletal models to address biomedical questions in human and animal mobility.
Project Lead: Ajay Seth and Adam Kewley (Delft University of Technology)
SciPy: Fundamental Tools for Biomedical Research
To better serve biomedical applications, SciPy will add important new features, perform essential maintenance, and disseminate the work to biomedical researchers and software developers.
Project Lead: Matt Haberland (California Polytechnic State University, San Luis Obispo)
Sparse Arrays for Scientific Python
To improve sparse structures in SciPy so they support array semantics, to deprecate SciPy’s sparse metrics, and to assist with sparse array adoption in downstream ecosystem packages.
Project Lead: Stéfan van der Walt (University of California, Berkeley)
Strengthening Computational Neuroanatomy Using DIPY
To extend DIPY’s registration framework for generic use in biomedical research, add parallel computing, strengthen maintenance, expand documentation, and improve educational capabilities.
Project Lead: Serge Koudoro (Indiana University – DIPY)